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racX [2017-09-16 18:10:13]
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racX [2017-09-16 18:10:13]

amino acid racemase, production of D-amino acids
locus
BSU34430
pI
5.40
mw
25.14 kDa
protein length
227 aa Sequence Blast
gene length
681 bp Sequence Blast
function
unknown
product
amino acid racemase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

    • Gene

    Coordinates
    3,533,419 → 3,534,102

    The protein

    Protein family

  • aspartate/glutamate racemases family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|FE672C27CF019E18A526DE8E6779788DDE54056E|pbpE]-[gene|2ABCC493C6CA847A7BC65B1200A9B6490621462A|racX]
    description
    [Pubmed|8491712]

    sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|8491712,12207695], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]

    • regulation

  • induced by cell wall stress ([protein|search|SigW]) [Pubmed|8491712,12207695]
    • view in new tab

    Biological materials

    Mutant

  • BKE34430 (Δ[gene|2ABCC493C6CA847A7BC65B1200A9B6490621462A|racX]::erm trpC2), available at [http://www.bgsc.org/getdetail.php?bgscid=BSU34430 BGSC], upstream reverse: 
    _UP1_TCCGATCATCAAATTCATTC
    , downstream forward: 
    _UP4_TAGCTTCAGACAAGGACTGT
  • BKK34430 (Δ[gene|2ABCC493C6CA847A7BC65B1200A9B6490621462A|racX]::kan trpC2), available at [http://www.bgsc.org/getdetail.php?bgscid=BSU34430 BGSC], upstream reverse: 
    _UP1_TCCGATCATCAAATTCATTC
    , downstream forward: 
    _UP4_TAGCTTCAGACAAGGACTGT

    • References

  • 8491712,19063962,9987136,7592498,20817675